Plot Marlin generates time series, spatial, or length composition plots from marlin run — plot_marlin • marlin

Plot Marlin generates time series, spatial, or length composition plots from marlin run

Usage

plot_marlin(
  ...,
  steps_to_plot = NA,
  plot_var = "ssb",
  plot_type = "time",
  fauna = NULL,
  drop_recruits = TRUE,
  plots = "fauna",
  max_scale = TRUE
)

Arguments

...: named or unnamed outputs of process_marlin
steps_to_plot: which steps to include in the plot
plot_var: the primary plotting variable, one of "c" (catch) "n" (numbers),"b" (biomass),"ssb" (spawning stock biomass)
plot_type: the plot type, one of "time", "length", or "space"
fauna: a fauna object corresponding to the critters in process_marlin outputs
drop_recruits: TRUE to drop recruits from length composition plots

Value

a plot

Examples

if (FALSE) { # \dontrun{

plot_marlin(
`MPA: Sharks Offshore` = proc_offshore_mpa,
`No MPA` = proc_nearshore,
`MPA: Sharks Nearshore` = proc_nearshore_mpa,
)

} # }